Sections of Dissertation started 11-17-12

2015-01-13

For each of these sections I could have an introduction, materials methods, results, and discussion section

outline of dissertation

Order of sections pre 12-3-12
Order of sections pre 1-27-13
Order of sections pre 8-17-13

"F:\kurt\storage\CIM Research Folder\DR\2013\8-17-13\Order of sections pre 8-17-13.txt"

Order of sections pre 10-27-13 (wikipad)

Ch 1. ABSTAT FROM ANTIBODY PEPTIDE INTENSITY DISTRIBUTION (previously called IMMUNE STATUS FROM ANTIBODY PEPTIDE INTENSITY DISTRIBUTION)

see also pure text notes on immune status from antibody peptide intensity distribution portal 10-27-13 (wikidpad)

Ch 2. PLATFORM FOR SCREENING CDNA LIBRARIES (lysates, nitrocellulose arrays, etc.)

see also pure text notes on platform for screening cDNA libraries section 8-18-13

Ch 3. Discovering immunogens

see also pure text notes on discovering immunogens section 8-18-13

Ch 4. Random sequence mimotopes

cover content in paper: Random sequence mimotopes capture immune-specific antibodies and predict epitope motifs
see also pure text notes on random sequence mimotopes section 8-19-13
-"F:\kurt\storage\CIM Research Folder\DR\2013\8-19-13\pure text notes on random sequence mimotopes section 8-19-13.txt"

Introduction for High throughput screening of tumor cDNA library section started 11-17-12
Information for 3 prime cDNA library started 2-15-13

Appendix Sections
Appendix Section 1: Age associated stem cell autoimmunity

pure text notes on age associated stem cell autoimmunity section 8-19-13
-"F:\kurt\storage\CIM Research Folder\DR\2013\8-19-13\pure text notes on age associated stem cell autoimmunity section 8-19-13.txt"

Appendix Section 2: Phage antibody libraries

see also pure text notes on phage antibody libraries 8-27-13 (in wikipad)
-"F:\kurt\storage\wikipad\KurtWhittemoreWiki\data\pure text notes on phage antibody libraries 8-27-13.wiki"

Appendix Sections 3: Purification of antibodies with random peptides

pure text notes on purification of antibodies with random peptides 8-29-13 (in wikipad)

Appendix Section 4: Automatic Array Alignment

pure text notes on automatic array alignment section 8-29-13
-"F:\kurt\storage\CIM Research Folder\DR\2013\8-29-13\pure text notes on automatic array alignment section 8-29-13.txt"

Appendix Section 5: CONSTRUCTION OF HUMAN TUMOR CDNA

pure text notes on construction of human tumor cDNA section 8-30-13 (in wikipad)

Appendix Section 6: copy of HVI paper (?? I don't know why I wrote this line previously 03-30-2014d1120)
Appendix Section 7: ABSTAT ANALYSIS OF TUMOR CDNA LIBRARY MICE

see: AbStat Analysis of Tumor cDNA Library Mice 04-03-2014d1106