obtaining remaining calculations for 330k data 9-16-13
2014-08-29++ obtaining remaining calculations for 330k data 9-16-13
results of entropy program run
There should be 7 that are complete now.
entropy cv norm_entropy norm_cv
100 - <- has 532 median
102 - <- has 532 median
104 9.085677125392328 1.595184746414981 5.951722099425068 1.5974551314019851
105 9.113400655141866 1.6724887892506526 6.192229643372197 1.674894095327445
106 9.096987666261892 1.5280600274280118 6.063822852809222 1.5309022481391588
108 0.0 <- has 532 median
42 9.278057435589153 1.4357259411538181 5.773181525655899 1.4385439597360912
43 8.765132539872369 1.4208266332327366 5.841615159414257 1.424545080065471
82 - <- has 532 median
86 9.218098147695956 9.218098147695956 5.707260149301972 0.9186058664376466
88 9.00352963698547 0.9631484455132815 5.674878826713822 0.965992045030718
94 - <- has 532 median
Of the samples that did not run, why didn't they run?
Here are the runtimes of the samples
-6156569.newmoab jobTemp.saguaro lwang138 00:01:01 C serial
--corresponds to
java -jar "/home/lwang138/entropy/input/EntropyOfArray090413_2.jar" /home/lwang138/entropy/input/rerun_of_46/42 "4-46 S4 H3 Hi P20 111312 DTRA 1 S" -Xmx6144
^this doesn't make sense though because 42 completed successfully.
6156575.newmoab jobTemp.saguaro lwang138 12:04:47 C serial
6156576.newmoab jobTemp.saguaro lwang138 12:06:23 C serial
6156577.newmoab jobTemp.saguaro lwang138 12:19:00 C serial
6156578.newmoab jobTemp.saguaro lwang138 12:20:55 C serial
6156579.newmoab jobTemp.saguaro lwang138 00:00:00 C serial
6156580.newmoab jobTemp.saguaro lwang138 00:00:00 C serial
6156581.newmoab jobTemp.saguaro lwang138 00:00:00 C serial
6156582.newmoab jobTemp.saguaro lwang138 10:18:39 C serial
6156583.newmoab jobTemp.saguaro lwang138 10:07:01 C serial
6156584.newmoab jobTemp.saguaro lwang138 10:13:01 C serial
6156585.newmoab jobTemp.saguaro lwang138 00:00:58 C serial
There is a possibility these jobs had a problem because there was a problem with the filename. For example, perhaps the following symbols cause problems: _, #, .
I'll replace _ with u
and
# with n
and
. with d
Now I'll start a new series of jobs for these 5 samples.
location of samples here
/home/lwang138/entropy/input/rerun_of_46_2
chmod +x jobScript.saguaro
./jobScript.saguaro cmd_original.saguaro pbs.saguaro