cbx3 sequencing results 9-16-13

2014-08-29

++ cbx3 sequencing results 9-16-13

Cbx3 sequencing results 9-16-13
looked at Cbx3 sequencing results
found here
"F:\kurt\storage\CIM Research Folder\DR\2013\9-16-13\Cbx3_investigation\Cbx3 sequencing results with 1p2 8-26-13"

made a new sequencher file which had sequences from this previous sequencher file
-"F:\kurt\storage\CIM Research Folder\DR\2013\8-23-13\sequence results 8-23-13\sequencing results 8-23-13.SPF"

>insert_sequence
"F:\kurt\storage\CIM Research Folder\DR\2013\9-16-13\Cbx3_investigation\insert_sequence_9-16-13.txt"
>Hnrpul1 sequence

The insert sequence has a 99% coverage and a 99% identity with the Hnrpul1 sequence.
"F:\kurt\storage\CIM Research Folder\DR\2013\9-16-13\Cbx3_investigation\Hnrpul1 sequence 9-16-13.txt"

summary of result:
The approximately 1000-1200 bp side product fragment produced when performing a pcr with primers to amplify Cbx3 with tumor cDNA template corresponds to a portion of a 3' end Hnrpul1 transcript sequence.