all human nucleotide sequences 06-26-2014d0925
2014-08-29all human nucleotide sequences 06-26-2014d0925
all human nucleotide sequences
- obtained by typing: ""Homo sapiens"porgn:__txid9606" into the ncbi nucleotide search
- there are 20933583 sequences
19 GB file
"C:\Users\kurtw_000\Documents\kurt\storage\pDR\lgdata_DR\2014\06-26-2014d0924\all human nucleotide sequences 06-26-2014d0923.fasta"
Some sequences of interest missing from this database
- Accession: BC046147.1 SMC like (in the nr database). . Accesion = BC112127 on Mammalian Gene Collection website
- -maybe the sequence is in the database by another name. . If I want to do a blast to search this file I need to convert it into a database. If I want to convert it into a database, I need to split the file since it is too large (I think I would need to write a Java program to do this).
- -searched: BC046147.1
GCGGCCTGTCCTACTGCCGCCGGCGCCGCGGCCGTCATGGGGTTCCTGAAACTGATTGAGATTGAGAACTTTAAGTCGTACAAGGGTCGACAGATTATCGGACCATTTCAGAGGTTCACCGCCATCATTGGACCCAATGGCTCTGGGTGCTGTGGAATCTATTGCCATGAAGAACCCCAAAGAGAGGACAGCTCTATTTGAAGAGATTAGTCGTTCTGGGGAGCTGGCGCAGGAGTATGACAAGCGAAAGAAGGAAATGGTGAAGGCTGAAGAGGACACACAGTTTAATTACCATCGCAAGAAAAATATTGCGGCTGAACGCAAGGAAGCAAAGCAGGAGAAAGAAGAGGCTGACCGGTACCAGCGCCTGAAGGATGAGGTAGTACGGGCTCAGGTACAGCTGCAGCTCTTTAAGCTTTACCATAATGAAGTGGAAATTGAGAAGCTCAACAAGGAACTGGCCTCAAAGAACAAGGAGAATCGCTTGAACCCAGGAGGCGGAGGTTGTGGTGAGCGAAGATCGTGCCATTGCACTCCAGCCTGGGCAACAAGAGCAAAACTCTGTCTCAAAAAAAAAAAAAAGATATAAATCACAATAAATAAATAGGTCAATACAAATGTTGGCCAGGCGTGGTGGCACATGCCCATAGTCGCAGCTACTCTGGAGGCAGAGGCAGGAGGATCACTTGAGCCCATGAATTTGAGGCAGCAGTGAGCTATGATTGTGCCACTGTACTCCAGTCTGGGTGACAGAGTGAGACCCCATCTCTAAATAAATAGGTCAAACCCTTAAAAATATTTAAATTCTTAAAAAAAAAAAAAAA