Gene Expression Omnibus GEO datasets of young and aged mice 11-04-2014d1747
2015-01-13Gene Expression Omnibus GEO datasets of young and aged mice 11-04-2014d1747
I found about 90 downloadable young aged mouse datasets. 11-04-2014d1749
I put a "*" next to a couple of datasets that looked particularly interesting.
potential geo datasets
- s: mouse young aged old (I may want to go back later and just search for "mouse young aged" and "mouse young old")
- -Age effect on skeletal muscle precursor cells
- --GDS4892
- -Aging effect on bone marrow hematopoietic stem cells
- --GSE32719
- -Age-associated aneuploidy model
- --GSE11667
- -Male and female thymi response to aging and caloric restriction (B)
- --GSE7829
- -Neurological aging models: retinas and hippocampi
- --GSE6238
- -Age effect on livers of long-lived Snell dwarf mutants
- --GSE3129
- -Age effect on hematopoietic stem cells
- --GSE4332
- -Aging-induced type I interferon response at the choroid plexus negatively affects brain function.
- --GSE62762
- -Changes in nucleosome occupancy associated with metabolic alterations in aged mammalian liver ChIP-seq
- --GSE60393
- -Genome-wide expression profiles in young and old mouse liver RNA-seq
- --GSE57809
- -Nucleosome occupancy profiles in young and old mouse liver MNase-Seq
- --GSE58005
- -SIRT1 deficiency in microglia contributes to cognitive decline in aging and neurodegeneration via epigenetic regulation of IL-1beta
- --GSE56452
- -Environmental enrichment modulates 5-hydroxymethylcytosine dynamics in hippocampus
- --GSE61194
- -Genome-Wide Profiling of miRNA-mRNA regulatory network in Skeletal Muscle with Aging miRNA
- --GSE55164
- -Genome-Wide Profiling of miRNA-mRNA regulatory network in Skeletal Muscle with Aging mRNA
- --GSE55163
- -Gene expression from aged and young sciatic nerve after nerve injury
- --GSE59040
- -Gene expression from aged and young dorsal root ganglia after nerve injury
- --GSE58982
- -Effects of preoperative fasting on renal ischemia-reperfusion injury in young-lean and aged overweight mice
- --GSE52982
- -Global gene expression in response to SARS mouse adapted variants MA-15, MA-15epsilon, and MA-15-gamma in young and aged mice
- --GSE36969
- -Restoring Systemic GDF11 Levels Reverses Age-Related Dysfunction in Mouse Skeletal Muscle
- --GPL1261
- -MicroRNA-188 regulates age-related switch between osteoblast and adipocyte differentiation
- --GSE57127
- -AMPK agonist AICAR improves cognition and motor coordination in young and aged mice
- --GSE50873
- -Proton irradiation augments the reduction in tumor progression observed with advanced age
- --GSE45609
- -Geriatric muscle stem cells switch reversible quiescence into senescence (Set 3; Adult vs. Young)
- --GSE53726
- -Geriatric muscle stem cells switch reversible quiescence into senescence (Set 2; Old/Geriatric vs. Young and SAMR1 vs. SAMP8)
- --GSE53725
- -Geriatric muscle stem cells switch reversible quiescence into senescence (Set 1; Geriatric vs. Young)
- --GSE53724
- -microRNA Expression of mice corneal endothelia
- --GSE48094
- -Progressive loss of PGC-1alpha expression in aging muscle potentiates glucose intolerance and systemic inflammation
- --GPL1261
- -Methylomic analysis identifies the involvement of migration and adhesion genes in the ageing of primary haematopoietic stem cells
- --GSE41658
- -Genomic profiling of type-1 adult diabetic and aged normoglycemic mice liver
- --GSE50613
- -P38 signaling underlies a cell-autonomous loss of stem cell self-renewal in aged muscle
- --GSE47104
- -Hippocampal Gene Expression in Young and Adult Mice with Memory Deficits
- --GSE49699
- -Novel approach to select genes from RMA normalized microarray data using functional hearing tests in aging mice.
- --GSE49543
- -Expression data from fresh and cultured islets at different glucose concentrations
- --GSE42591
- -Age and Space Irradiation Modulate Tumor Progression: Implications for Carcinogenesis Risk
- --GSE45606
- -Age-mediated transcriptomic changes in adult mouse brain ventral tegmental area
- --GSE45044
- -Age-mediated transcriptomic changes in adult mouse substantia nigra
- --GSE45043
- -Epigenetic determinants of muscle stem cell quiescence and chronological aging
- --GSE47177
- -Chronic Caloric Restriction Preserves Mitochondrial Function in Senescence Without Increasing Mitochondrial Biogenesis (** this looks like a good one)
- --GSE36285
- -oocyte miRNA profiling by array
- --GSE17966
- -The Expression of MicroRNA and microRNA Clusters in the Aging Heart
- --GSE32935
- -Transcriptional Alterations in Skeletal Muscle Following Desmin Deletion
- --GPL8321
- -Deep sequencing of small RNAs from Mouse brain during aging
- --GSE34393
- -Biological Aging and Circadian Mechanisms in Murine Brown Adipose Tissue, Inguinal White Adipose Tissue, and Liver (Jan 2010 dataset)
- --GSE25324
- -Biological Aging and Circadian Mechanisms in Murine Brown Adipose Tissue, Inguinal White Adipose Tissue, and Liver (Nov 2009 dataset)
- --GSE25323
- -MicroRNA-29 in Aortic Dilation: Implications for Aneurysm Formation
- --GSE32937
- -Age Dependent Decrease in Vascular Remodeling Response in LDLr-/- mice unveils a role of Quaking in Vascular Homeostasis
- --GSE9310
- -Accumulating mitochondrial DNA mutations drive premature hematopoietic aging phenotypes molecularly distinct from physiologic stem cell aging
- --GPL1261
- -Age-dependent decline in lung regeneration with loss of clonogenicity and myofibroblastic differentiation of lung fibroblasts
- --GSE27964
- -Gene expression analysis of 15-Lipoxygenase 2 (15-LOX2) transgenic mice
- --GSE15827
- -Hepatic xenobiotic metabolizing enzyme gene expression through the life stages of the mouse
- --GSE21716
- -The Effects of Aging on the Molecular and Cellular Composition of the Prostate Microenvironment
- --GSE21542
- -Altered gene expression is associated with age-dependent memory impairment
- --GSE20270
- -Age-related para-inflammation in the neuroretina of the mouse
- --GSE17423
- -Age Map, Cerebellum (A)
- --GSE8409
- -Transcriptome analysis of murine thymocytes reveals age-associated changes in thymic gene expression
- --GSE15945
- -p53- repressed miRNAs are involved with E2F in a feed forward loop promoting proliferation
- --GSE12821
- -Effect of age, calorie restriction and resveratrol on gene expression in mouse heart, brain, and skeletal muscle (** this looks like a really good one)
- --GSE11291
- --C:\Sync\pDR\lgData\nov 2014\11-05-2014d1411\age calorie restriction and resveratrol study June 2008
- -Age-associated increase in aneuploidy and changes in gene expression in mouse eggs.
- --GSE11667
- -Comparison of the transcriptional profiles of the retinal pigmental epithelium/choroid from young and old mice
- --GSE10965
- -AGEMAP_Bone_Marrow
- --GSE9898
- -AGEMAP_Spleen
- --GSE9908
- -AGEMAP_Skeletal_Muscle
- --GSE9907
- -AGEMAP_Lung
- --GSE9906
- -AGEMAP_Liver
- --GSE9905
- -AGEMAP_Kidney
- --GSE9904
- -AGEMAP_Heart
- --GSE9902
- -AGEMAP_Gonads
- --GSE9901
- -AGEMAP_Eye
- --GSE9900
- -AGEMAP_Adrenals
- --GSE9895
- -Age Map, Cerebral Cortex (B)
- --GSE8415
- -Age Map, Cerebellum (B)
- --GSE8414
- -Age Map, Striatum (A)
- --GSE8413
- -Age Map, Spinal Cord (A)
- --GSE8412
- -Age Map, Hippocampus (A)
- --GSE8411
- -Age Map, Cerebral Cortex (A)
- --GSE8410
- -Age Map, Striatum (B)
- --GSE8419
- -Age Map, Spinal Cord (B)
- --GSE8418
- -Age Map, Hippocampus (B)
- --GSE8417
- -Role of NF-kB in aging
- --GSE3845
- -Age-related transcriptional changes and the effect of dietary supplementation of vitamin E in the mouse brain
- --GSE8150
- -Age-related transcriptional changes and the effect of dietary supplementation of vitamin E in the mouse heart
- --GSE8146
- -Age Map, Thymus
- --GSE7829
- -Caloric restriction suppresses apoptotic cell death in the mammalian cochlea and leads to prevention of presbycusis
- --GSE4786
- -Mechanisms of Aging in Senescence-Accelerated Mice
- --GSE6238
- -Expression data from skeletal muscle of young, old and old calorie restricted mice
- --GSE6323
- -Hippocampal transcript profile in young and middle-aged mice
- --GSE5078
- -Cell intrinsic alterations underlie hematopoietic stem cell aging
- --GSE4332
- -Aging Liver Profiles of Long Lived Pit-1 Mutant Mouse (Snell) and Wild Type Controls
- --GSE3129
- -Age-associated alteration of gene expression patterns in mouse oocytes
- --GSE1646
- -mouse RPE/choroid age comparison - ATLAS arrays
- -- GSE565