Amino Acid Substitution Matrix
2014-08-29azim58 - Amino Acid Substitution Matrix
Amino Acid Substitution Matrix
aaindex
http://www.genome.jp/aaindex/
Krupa knows a fair amount on this topic.
She said that Guitope uses the Grantham matrix by default
She and Rebecca were working on their own custom matrix. This matrix is
called GUITOPE and can be found in the matrices.h file. Jack also had a
matrix called interface_5a.
S:\Research\DocInABox\People\Krupa\DTRA1\Umbrella approach to data
analysis\CIM Matrix\matrices.h
Krupa also mentioned something about the "umbrella approach" to
deconvoluting the array data. Here e-mail (9-18-12) can be found here: