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scratch notes on analysis of wafer 152 samples
2014-08-29
scratch notes on analysis of wafer 152 samples 11-25-13 I'd like to do a quick analysis of of the wafer 152 NSB wafer samples. commands java -jar "S:\Administration\Biostatistics\Immunosignature Entropy\Code\updated code 11-14-13\AbStatCode\AbStat111413d1633.jar" find_summary_numbers_from_folder_of_gprs "S:\Research\CIM-HealthTell\Experiments\20131011 HTChipV7P-152 Production Run - (HT-152)\Slide 2\900 Scans\genepix gprs" "F532 Median" -Xmx2000 Maybe I should try running some from my own computer java -jar "\\biofs.biodesign.asu.edu\CIM\Administration\Biostatistics\Immunosignature Entropy\Code\updated code 11-14-13\AbStatCode\AbStat111413d1633.jar" find_summary_numbers_from_folder_of_gprs "\\biofs.biodesign.asu.edu\CIM\Research\CIM-HealthTell\Experiments\20131011 HTChipV7P-152 Production Run - (HT-152)\Slide 3\genepix gprs" "F532 Median" -Xmx2000 slide 4 java -jar "S:\Administration\Biostatistics\Immunosignature Entropy\Code\updated code 11-14-13\AbStatCode\AbStat111413d1633.jar" find_summary_numbers_from_folder_of_gprs "S:\Research\CIM-HealthTell\Experiments\20131011 HTChipV7P-152 Production Run - (HT-152)\Slide 4\genepix gprs" "F532 Median" -Xmx2000 slide 5 java -jar "S:\Administration\Biostatistics\Immunosignature Entropy\Code\updated code 11-14-13\AbStatCode\AbStat111413d1633.jar" find_summary_numbers_from_folder_of_gprs "S:\Research\CIM-HealthTell\Experiments\20131011 HTChipV7P-152 Production Run - (HT-152)\Slide 5\GPRS" "F532 Median" -Xmx2000 slide 6 java -jar "S:\Administration\Biostatistics\Immunosignature Entropy\Code\updated code 11-14-13\AbStatCode\AbStat111413d1633.jar" find_summary_numbers_from_folder_of_gprs "S:\Research\CIM-HealthTell\Experiments\20131011 HTChipV7P-152 Production Run - (HT-152)\Slide 6\GPRs" "F532 Median" -Xmx2000 slide 7 java -jar "S:\Administration\Biostatistics\Immunosignature Entropy\Code\updated code 11-14-13\AbStatCode\AbStat111413d1633.jar" find_summary_numbers_from_folder_of_gprs "S:\Research\CIM-HealthTell\Experiments\20131011 HTChipV7P-152 Production Run - (HT-152)\Slide 7\GPRs" "F532 Median" -Xmx2000 slide 8 java -jar "\\biofs.biodesign.asu.edu\CIM\Administration\Biostatistics\Immunosignature Entropy\Code\updated code 11-14-13\AbStatCode\AbStat111413d1633.jar" find_summary_numbers_from_folder_of_gprs "\\biofs.biodesign.asu.edu\CIM\Research\CIM-HealthTell\Experiments\20131011 HTChipV7P-152 Production Run - (HT-152)\Slide 8\genepix gprs" "F532 Median" -Xmx2000 \\biofs.biodesign.asu.edu\CIM\Research\CIM-HealthTell\Experiments\20131011 HTChipV7P-152 Production Run - (HT-152)\Slide 8\genepix gprs slide 8 on local shared drive java -jar "S:\Administration\Biostatistics\Immunosignature Entropy\Code\updated code 11-14-13\AbStatCode\AbStat111413d1633.jar" find_summary_numbers_from_folder_of_gprs "S:\Research\CIM-HealthTell\Experiments\20131011 HTChipV7P-152 Production Run - (HT-152)\Slide 8\genepix gprs" "F532 Median" -Xmx2000 slide 9 java -jar "S:\Administration\Biostatistics\Immunosignature Entropy\Code\updated code 11-14-13\AbStatCode\AbStat111413d1633.jar" find_summary_numbers_from_folder_of_gprs "S:\Research\CIM-HealthTell\Experiments\20131011 HTChipV7P-152 Production Run - (HT-152)\Slide 9\GenePix GPR's" "F532 Median" -Xmx2000 slide 10 java -jar "S:\Administration\Biostatistics\Immunosignature Entropy\Code\updated code 11-14-13\AbStatCode\AbStat111413d1633.jar" find_summary_numbers_from_folder_of_gprs "S:\Research\CIM-HealthTell\Experiments\20131011 HTChipV7P-152 Production Run - (HT-152)\Slide 10\GPR" "F532 Median" -Xmx2000 slide 11 java -jar "S:\Administration\Biostatistics\Immunosignature Entropy\Code\updated code 11-14-13\AbStatCode\AbStat111413d1633.jar" find_summary_numbers_from_folder_of_gprs "S:\Research\CIM-HealthTell\Experiments\20131011 HTChipV7P-152 Production Run - (HT-152)\Slide 11\GPR's" "F532 Median" -Xmx2000 slide 12 java -jar "S:\Administration\Biostatistics\Immunosignature Entropy\Code\updated code 11-14-13\AbStatCode\AbStat111413d1633.jar" find_summary_numbers_from_folder_of_gprs "S:\Research\CIM-HealthTell\Experiments\20131011 HTChipV7P-152 Production Run - (HT-152)\Slide 12\gprs" "F532 Median" -Xmx2000 slide 13 java -jar "S:\Administration\Biostatistics\Immunosignature Entropy\Code\updated code 11-14-13\AbStatCode\AbStat111413d1633.jar" find_summary_numbers_from_folder_of_gprs "S:\Research\CIM-HealthTell\Experiments\20131011 HTChipV7P-152 Production Run - (HT-152)\Slide 12" "F532 Median" -Xmx2000 Tris-Buffered Saline and Tween 20 The deadline for the application is December 16th. An abstract, research project proposal, and an updated CV should be sent by December 1st. Dear Kurt, Maria Blasco told me to contact you and send you the below and attached information regarding a Postdoctoral fellowships by AXA Research Fund. She would like that you apply to this postdoctoral fellowship, if possible. Please confirm and if you need more information, do not hesitate to contact us. Best regards Susa Alcami Slide11 RowF 123 910AL 10252013 RED _b1.gpr R5 R Slide11 RowF 123 910AL 10252013 RED _b2.gpr L6 L Slide11 RowF 123 910AL 10252013 RED _b3.gpr 17 U Slide11 RowG 123 910AL 10252013 RED _b1.gpr M5 M Slide11 RowG 123 910AL 10252013 RED _b2.gpr 10 U Slide11 RowG 123 910AL 10252013 RED _b3.gpr 64 U Slide11 RowH 123 910AL 10252013 RED _b1.gpr 159 U Slide11 RowH 123 910AL 10252013 RED _b2.gpr 38 U Slide11 RowH 123 910AL 10252013 RED _b3.gpr 90 U Slide11_RowA 123 910AL 10252013 RED _b1.gpr 07 U Slide11_RowA 123 910AL 10252013 RED _b2.gpr L2 L Slide11_RowA 123 910AL 10252013 RED _b3.gpr 73 U Slide11_RowB 123 910AL 10252013 RED _b1.gpr M9 M Slide11_RowB 123 910AL 10252013 RED _b2.gpr 91 U Slide11_RowB 123 910AL 10252013 RED _b3.gpr M9 M Slide11_RowC 123 910AL 10252013 RED _b1.gpr M4 M Slide11_RowC 123 910AL 10252013 RED _b2.gpr 103 U Slide11_RowC 123 910AL 10252013 RED _b3.gpr 21 U Slide11_RowD 123 910AL 10252013 RED _b1.gpr 04 U Slide11_RowD 123 910AL 10252013 RED _b2.gpr 124 U Slide11_RowD 123 910AL 10252013 RED _b3.gpr 7 U Slide11_RowE 123 910AL 10252013 RED _b1.gpr R9 R Slide11_RowE 123 910AL 10252013 RED _b2.gpr 19 U Slide11_RowE 123 910AL 10252013 RED _b3.gpr 23 U DEN L M MAL N NORM O P Q R S U WNV 72.7 0.455 0.727 59.1 0.182 0.591 45.5 -0.0909 0.434 45.5 -0.0909 0.455 72.7 0.455 0.727 59.1 0.182 0.591 45.5 -0.0909 0.455 45.5 -0.0909 0.434 j48graft tree all 83.9 0.210 0.645 smo all 87.4 0 0.5 smo random all 87.4 0 0.5 j48 graft tree all random 85.1 -0.0405 0.429 Healthy sandwiches, salads, chips and deserts
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