all human nucleotide sequences 06-26-2014d0925

2014-08-29

all human nucleotide sequences
-obtained by typing: ""Homo sapiens"[porgn:__txid9606]" into the ncbi nucleotide search
-there are 20933583 sequences

19 GB file
"C:\Users\kurtw_000\Documents\kurt\storage\pDR\lgdata_DR\2014\06-26-2014d0924\all human nucleotide sequences 06-26-2014d0923.fasta"

Some sequences of interest missing from this database
-Accession: BC046147.1 SMC like (in the nr database). . Accesion = BC112127 on Mammalian Gene Collection website
--maybe the sequence is in the database by another name. .  If I want to do a blast to search this file I need to convert it into a database.  If I want to convert it into a database, I need to split the file since it is too large (I think I would need to write a Java program to do this).
--searched: BC046147.1
{
GCGGCCTGTCCTACTGCCGCCGGCGCCGCGGCCGTCATGGGGTTCCTGAAACTGATTGAGATTGAGAACTTTAAGTCGTACAAGGGTCGACAGATTATCGGACCATTTCAGAGGTTCACCGCCATCATTGGACCCAATGGCTCTGGGTGCTGTGGAATCTATTGCCATGAAGAACCCCAAAGAGAGGACAGCTCTATTTGAAGAGATTAGTCGTTCTGGGGAGCTGGCGCAGGAGTATGACAAGCGAAAGAAGGAAATGGTGAAGGCTGAAGAGGACACACAGTTTAATTACCATCGCAAGAAAAATATTGCGGCTGAACGCAAGGAAGCAAAGCAGGAGAAAGAAGAGGCTGACCGGTACCAGCGCCTGAAGGATGAGGTAGTACGGGCTCAGGTACAGCTGCAGCTCTTTAAGCTTTACCATAATGAAGTGGAAATTGAGAAGCTCAACAAGGAACTGGCCTCAAAGAACAAGGAGAATCGCTTGAACCCAGGAGGCGGAGGTTGTGGTGAGCGAAGATCGTGCCATTGCACTCCAGCCTGGGCAACAAGAGCAAAACTCTGTCTCAAAAAAAAAAAAAAGATATAAATCACAATAAATAAATAGGTCAATACAAATGTTGGCCAGGCGTGGTGGCACATGCCCATAGTCGCAGCTACTCTGGAGGCAGAGGCAGGAGGATCACTTGAGCCCATGAATTTGAGGCAGCAGTGAGCTATGATTGTGCCACTGTACTCCAGTCTGGGTGACAGAGTGAGACCCCATCTCTAAATAAATAGGTCAAACCCTTAAAAATATTTAAATTCTTAAAAAAAAAAAAAAA
}

azim58wiki: