Table of Transcript Info 3-10-13

2015-01-13

azim58 - Table of Transcript Info 3-10-13

Some information can be derived from the table found here
"C:\kurt\storage\CIM Research Folder\DR\2012\11-25-12\cDNA Sequence Analysis\cDNA sequence analysis clean 12-11-12.pptx"
and here (actually the table is not in this powerpoint, but other details are)
"C:\kurt\storage\CIM Research Folder\DR\2012\11-25-12\cDNA Sequence Analysis\cDNA Sequence Analysis with source info 2 11-25-12.pptx"
found on the 8-26-12 Plasmids for verification page

I would like the table to have the following information
Sequence Total Bp in Insert Bp to Stop Codon in Clone 5' truncated?
Frame-shift? No. of PM Extra bp

table of transcript info here
"C:\kurt\storage\CIM Research Folder\DR\2013\3-10-13\work on paper\Table of transcript info\table of transcript info.docx"

Note that Eif1a is a strange case. It is 5' truncated. However, it also
is missing the 3' end of the normal transcript, but it has a poly A tail.
Perhaps there is a normal alternative splicing form of this gene that was
missing from the database at the time the BLAST was performed.
Sequence Mxd1 also falls into this same category.

As of right now 3-28-13 this will be "Table 2"
"C:\kurt\storage\CIM Research Folder\DR\2013\3-10-13\work on paper\Table of transcript info\Table 2.docx"

===========================================================================
Information for sequences in clones Powerpoint Slide
"C:\kurt\storage\CIM Research Folder\DR\2013\4-1-13\presentation prep\Information for Sequences in Clones.pptx"

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If I want to send the sequence information to someone else, I can use these files
-"C:\Users\kurtw_000\Documents\kurt\storage\CIM Research Folder\DR\2012\11-25-12\cDNA Sequence Analysis\cDNA Sequence Analysis.xlsx"
-"C:\Users\kurtw_000\Documents\kurt\storage\CIM Research Folder\DR\2012\11-25-12\cDNA Sequence Analysis\cDNA sequence analysis clean 12-11-12.pptx"
-"C:\Users\kurtw_000\Documents\kurt\storage\CIM Research Folder\DR\2012\11-25-12\cDNA Sequence Analysis.zip"
--I also placed the files on the shared drive here:
---S:\Research\Cancer_Eradication\Discovering tumor specific antigens\Sequence Info for Identified Clones

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