RNA Transcriptome

2015-01-13

azim58 - RNA Transcriptome

Number of RNA transcripts:
60,000 in yeast according to B10NUMB3R5 website
tens of thousands according to From DNA to RNA- Molecular Biology of the
Cell document
43,000 according to What transcripts are found in a human cell? - Genome
Biology

Copy number of less abundant transcripts: 1-5 according to What
transcripts are found in a human cell? - Genome Biology
almost one-quarter of expressed protein-coding genes and 80% of the
detected lncRNAs are present in our samples in 1 or fewer copies per
cell. according to
Landscape of transcription in human cells
Copy number of more abundant transcripts:
highest number: 9,417 according to What transcripts are found in a human
cell? - Genome Biology
highest number around 50,000 according to "Mapping and quantifying
mammalian transcriptomes by RNA-Seq."
search for transcript abundance info 3-29-13

Papers that may have some useful information
The balance sheet for transcription: an analysis of nuclear RNA
metabolism in mammalian cells

60,000 mRNA transcripts per cell in yeast
http://bionumbers.hms.harvard.edu/bionumber.aspx?s=y&amp;id=103023&amp;ver=
2
Single-RNA counting reveals alternative modes of gene expression in yeast.
PMID 19011635

This B10NUMB3R5 website looks quite useful

From DNA to RNA- Molecular Biology of the Cell document

What transcripts are found in a human cell? - Genome Biology

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