Meme suite

2015-01-13

azim58 - Meme suite

MEME suite
The MEME Suite allows you to:
discover motifs using MEME, DREME (DNA only) or GLAM2 on groups of
related DNA or protein sequences,
search sequence databases with motifs using MAST, FIMO, MCAST or
GLAM2SCAN,
compare a motif to all motifs in a database of motifs,
associate motifs with Gene Ontology terms via their putative target
genes, and
analyse motif enrichment using SpaMo or CentriMo.

program for computer
"C:\Users\kurtw_000\Documents\kurt\storage\lgdata_DR\2014\06-19-2014d1331\meme"

interactive website
http://meme.nbcr.net/meme/intro.html
australian version of website (sometimes one set of servers will not work
with certain databases or have some other problems)
http://meme.ebi.edu.au/

papers

MEME c discovering and analyzing DNA and protein sequence motifs paper

MEME SUITE c tools for motif discovery and searching paper

-[MAST motif alignment and search tool 6-19-14]

-[installing meme on windows 07-03-2014d1052]

Contact Meme
-meme@sdsc.edu
-old contact info
--meme@nbcr.net

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test of MAST 4-24-13

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