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Gene Expression Omnibus GEO datasets of young and aged mice 11-04-2014d1747
2015-01-13
Gene Expression Omnibus GEO datasets of young and aged mice 11-04-2014d1747 I found about 90 downloadable young aged mouse datasets. 11-04-2014d1749 I put a "*" next to a couple of datasets that looked particularly interesting. potential geo datasets -s: mouse young aged old (I may want to go back later and just search for "mouse young aged" and "mouse young old") --Age effect on skeletal muscle precursor cells ---GDS4892 --Aging effect on bone marrow hematopoietic stem cells ---GSE32719 --Age-associated aneuploidy model ---GSE11667 --Male and female thymi response to aging and caloric restriction (B) ---GSE7829 --Neurological aging models: retinas and hippocampi ---GSE6238 --Age effect on livers of long-lived Snell dwarf mutants ---GSE3129 --Age effect on hematopoietic stem cells ---GSE4332 --Aging-induced type I interferon response at the choroid plexus negatively affects brain function. ---GSE62762 --Changes in nucleosome occupancy associated with metabolic alterations in aged mammalian liver [ChIP-seq] ---GSE60393 --Genome-wide expression profiles in young and old mouse liver [RNA-seq] ---GSE57809 --Nucleosome occupancy profiles in young and old mouse liver [MNase-Seq] ---GSE58005 --SIRT1 deficiency in microglia contributes to cognitive decline in aging and neurodegeneration via epigenetic regulation of IL-1beta ---GSE56452 --Environmental enrichment modulates 5-hydroxymethylcytosine dynamics in hippocampus ---GSE61194 --Genome-Wide Profiling of miRNA-mRNA regulatory network in Skeletal Muscle with Aging [miRNA] ---GSE55164 --Genome-Wide Profiling of miRNA-mRNA regulatory network in Skeletal Muscle with Aging [mRNA] ---GSE55163 --Gene expression from aged and young sciatic nerve after nerve injury ---GSE59040 --Gene expression from aged and young dorsal root ganglia after nerve injury ---GSE58982 --Effects of preoperative fasting on renal ischemia-reperfusion injury in young-lean and aged overweight mice ---GSE52982 --Global gene expression in response to SARS mouse adapted variants MA-15, MA-15epsilon, and MA-15-gamma in young and aged mice ---GSE36969 --Restoring Systemic GDF11 Levels Reverses Age-Related Dysfunction in Mouse Skeletal Muscle ---GPL1261 --MicroRNA-188 regulates age-related switch between osteoblast and adipocyte differentiation ---GSE57127 --AMPK agonist AICAR improves cognition and motor coordination in young and aged mice ---GSE50873 --Proton irradiation augments the reduction in tumor progression observed with advanced age ---GSE45609 --Geriatric muscle stem cells switch reversible quiescence into senescence (Set 3; Adult vs. Young) ---GSE53726 --Geriatric muscle stem cells switch reversible quiescence into senescence (Set 2; Old/Geriatric vs. Young and SAMR1 vs. SAMP8) ---GSE53725 --Geriatric muscle stem cells switch reversible quiescence into senescence (Set 1; Geriatric vs. Young) ---GSE53724 --microRNA Expression of mice corneal endothelia ---GSE48094 --Progressive loss of PGC-1alpha expression in aging muscle potentiates glucose intolerance and systemic inflammation ---GPL1261 --Methylomic analysis identifies the involvement of migration and adhesion genes in the ageing of primary haematopoietic stem cells ---GSE41658 --Genomic profiling of type-1 adult diabetic and aged normoglycemic mice liver ---GSE50613 --P38 signaling underlies a cell-autonomous loss of stem cell self-renewal in aged muscle ---GSE47104 --Hippocampal Gene Expression in Young and Adult Mice with Memory Deficits ---GSE49699 --Novel approach to select genes from RMA normalized microarray data using functional hearing tests in aging mice. ---GSE49543 --Expression data from fresh and cultured islets at different glucose concentrations ---GSE42591 --Age and Space Irradiation Modulate Tumor Progression: Implications for Carcinogenesis Risk ---GSE45606 --Age-mediated transcriptomic changes in adult mouse brain ventral tegmental area ---GSE45044 --Age-mediated transcriptomic changes in adult mouse substantia nigra ---GSE45043 --Epigenetic determinants of muscle stem cell quiescence and chronological aging ---GSE47177 --Chronic Caloric Restriction Preserves Mitochondrial Function in Senescence Without Increasing Mitochondrial Biogenesis (** this looks like a good one) ---GSE36285 --oocyte miRNA profiling by array ---GSE17966 --The Expression of MicroRNA and microRNA Clusters in the Aging Heart ---GSE32935 --Transcriptional Alterations in Skeletal Muscle Following Desmin Deletion ---GPL8321 --Deep sequencing of small RNAs from Mouse brain during aging ---GSE34393 --Biological Aging and Circadian Mechanisms in Murine Brown Adipose Tissue, Inguinal White Adipose Tissue, and Liver (Jan 2010 dataset) ---GSE25324 --Biological Aging and Circadian Mechanisms in Murine Brown Adipose Tissue, Inguinal White Adipose Tissue, and Liver (Nov 2009 dataset) ---GSE25323 --MicroRNA-29 in Aortic Dilation: Implications for Aneurysm Formation ---GSE32937 --Age Dependent Decrease in Vascular Remodeling Response in LDLr-/- mice unveils a role of Quaking in Vascular Homeostasis ---GSE9310 --Accumulating mitochondrial DNA mutations drive premature hematopoietic aging phenotypes molecularly distinct from physiologic stem cell aging ---GPL1261 --Age-dependent decline in lung regeneration with loss of clonogenicity and myofibroblastic differentiation of lung fibroblasts ---GSE27964 --Gene expression analysis of 15-Lipoxygenase 2 (15-LOX2) transgenic mice ---GSE15827 --Hepatic xenobiotic metabolizing enzyme gene expression through the life stages of the mouse ---GSE21716 --The Effects of Aging on the Molecular and Cellular Composition of the Prostate Microenvironment ---GSE21542 --Altered gene expression is associated with age-dependent memory impairment ---GSE20270 --Age-related para-inflammation in the neuroretina of the mouse ---GSE17423 --Age Map, Cerebellum (A) ---GSE8409 --Transcriptome analysis of murine thymocytes reveals age-associated changes in thymic gene expression ---GSE15945 --p53- repressed miRNAs are involved with E2F in a feed forward loop promoting proliferation ---GSE12821 --Effect of age, calorie restriction and resveratrol on gene expression in mouse heart, brain, and skeletal muscle (** this looks like a really good one) ---GSE11291 ---C:\Sync\pDR\lgData\nov 2014\11-05-2014d1411\age calorie restriction and resveratrol study June 2008 --Age-associated increase in aneuploidy and changes in gene expression in mouse eggs. ---GSE11667 --Comparison of the transcriptional profiles of the retinal pigmental epithelium/choroid from young and old mice ---GSE10965 --AGEMAP_Bone_Marrow ---GSE9898 --AGEMAP_Spleen ---GSE9908 --AGEMAP_Skeletal_Muscle ---GSE9907 --AGEMAP_Lung ---GSE9906 --AGEMAP_Liver ---GSE9905 --AGEMAP_Kidney ---GSE9904 --AGEMAP_Heart ---GSE9902 --AGEMAP_Gonads ---GSE9901 --AGEMAP_Eye ---GSE9900 --AGEMAP_Adrenals ---GSE9895 --Age Map, Cerebral Cortex (B) ---GSE8415 --Age Map, Cerebellum (B) ---GSE8414 --Age Map, Striatum (A) ---GSE8413 --Age Map, Spinal Cord (A) ---GSE8412 --Age Map, Hippocampus (A) ---GSE8411 --Age Map, Cerebral Cortex (A) ---GSE8410 --Age Map, Striatum (B) ---GSE8419 --Age Map, Spinal Cord (B) ---GSE8418 --Age Map, Hippocampus (B) ---GSE8417 --Role of NF-kB in aging ---GSE3845 --Age-related transcriptional changes and the effect of dietary supplementation of vitamin E in the mouse brain ---GSE8150 --Age-related transcriptional changes and the effect of dietary supplementation of vitamin E in the mouse heart ---GSE8146 --Age Map, Thymus ---GSE7829 --Caloric restriction suppresses apoptotic cell death in the mammalian cochlea and leads to prevention of presbycusis ---GSE4786 --Mechanisms of Aging in Senescence-Accelerated Mice ---GSE6238 --Expression data from skeletal muscle of young, old and old calorie restricted mice ---GSE6323 --Hippocampal transcript profile in young and middle-aged mice ---GSE5078 --Cell intrinsic alterations underlie hematopoietic stem cell aging ---GSE4332 --Aging Liver Profiles of Long Lived Pit-1 Mutant Mouse (Snell) and Wild Type Controls ---GSE3129 --Age-associated alteration of gene expression patterns in mouse oocytes ---GSE1646 --mouse RPE/choroid age comparison - ATLAS arrays --- GSE565
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