Feedback from Kathy 3-27-13

2015-01-13

azim58 - Feedback from Kathy 3-27-13

some notes about figures<>
-Table description on the top
--categorization of output from pool
--footnotes
-lower case e (for scientific notation
-full library as a library
--sub-library
--plot not a validation
-remove things you can't see
-Figures more towards the center of the page
-4T1 (not necessary to specify Balb/c)
-for SMC. . peptide instead of protein
-array scanned (not image)
-table to explain Figure 3
</>

Her tracked changes on the word document found here (original file from
her)
"C:\kurt\storage\CIM Research Folder\kwhittem\Papers\My Possible
Papers\3p_library\paper\Kathy feedback 3-27-13\original
file\3p_library_rough_draft_6_3-18-13.docx"

My implementation of the changes here
"C:\kurt\storage\CIM Research Folder\kwhittem\Papers\My Possible
Papers\3p_library\paper\Kathy feedback 3-27-13\my
revisions\3p_library_rough_draft_7_3-28-13.docx"

scanned document of Kathy's comments on figures and table here
"C:\kurt\storage\CIM Research Folder\kwhittem\Papers\My Possible
Papers\3p_library\paper\Kathy feedback 3-27-13\original file\Kathy's
comments on figures.pdf"

I need to make a table describing the components in the figures.
table for figure 3 outline
"C:\kurt\storage\CIM Research Folder\DR\2013\3-28-13\table for figure
3\table for figure 3 outline.xlsx"

===========================================================================
names of the 4 screens
-3e6 clone screen
-Validation of performance of selected lysate pools from 3e6 -clone screen
-pool reduction screen
-single clone array screen

alternative names for "clone"
original transformants, components, constituants

alternative name for "spot"
feature

alternative name for printing a new sublibrary from one of the features
rearraying, reduction, partitioning

===========================================================================

Rabbit sera? No mouse sera
sera or purified antibody? sera

16E3 correlates with lysate pool number 15*96+12*4+3 = 1491

21G4 correlates with lysate pool number 21*96+6*12+4 = 2092

Is Table 1 or Figure 3 represented in the text first?
-Figure 3 occurs on pg. 8
-Table 1 occurs on pg. 12
-Answer: so Figure 3 occurs 1st and Table 1 should become Table 2

My questions and comments for Kathy

-Who are the authors? Am I first author and you are second author?

-What are the affiliations?
a Center for Innovations in Medicine, The Biodesign Institute, Arizona
State University, Tempe, AZ, United States
b Biological Design Program, Arizona State University, Tempe, AZ, United
States

-Do we have to specify any special documentation for the mouse work we
did? I don't know much about this.

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