Blast of SMC1afs protein sequence 06-25-2014d1053

2014-08-29

SMC1 sequence is in human nr and in human est databases
-Blast of SMC1afs protein sequence against human est database with tblastn 06-25-2014d1028 (there are 5 sequences with 100% identity and 100% query coverage)
--"C:\Users\kurtw_000\Documents\kurt\storage\CIM Research Folder\DR\2014\06-25-2014d1027\Blast of SMC1afs protein sequence against human est database with tblastn 06-25-2014d1028.htm"
-Blast of SMC1afs protein sequence against human nr database with tblastn (there is a 100% identity and 100% query coverage sequence titled " Homo sapiens mRNA similar to SMC (structural maintenance of chromosomes 1)-like 1 (S. cerevisiae) (cDNA clone IMAGE:6064730)")
--"C:\Users\kurtw_000\Documents\kurt\storage\CIM Research Folder\DR\2014\06-25-2014d1027\Blast of SMC1afs protein sequence against human nr with tblastn 06-25-2014d1050.htm"
-Note that there are no sequences with 100% identity and 100% query coverage in the human refseq database

Additional notes
-Shen found SMC1fs present in some expression data associated with these
two files
--"F:\kurt\storage\CIM Research Folder\DR\2013\4-24-13\smc\28278223[gi] - GEO Profiles Results.htm"
--"C:\Users\kurtw_000\Documents\kurt\storage\CIM Research Folder\DR\2013\4-24-13\smc\GDS1962 - 1555677_s_at - BC046147  Glioma-derived stem cell factor effect on angiogenesis in the brain.htm"

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See also
-[BLAST of SMC1afs mimotopes against human unusual peptide database 07-01-2014d1640]

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